All functions

create_abbreviated_label()

Generate abbreviated strings

overlay_map_world() overlay_map_europe() overlay_map_usa()

PCAviz maps

PCAviz-package

Visualizing Principal Component Analysis

plot(<pcaviz>) screeplot(<pcaviz>) pcaviz_loadingsplot() pcaviz_violin() pcaviz_colors_categorical() pcaviz_colors_continuous() pcaviz_shapes() theme_pcaviz() pcaviz_reduce_whitespace() pcaviz_abbreviate_var() pcaviz_summary_default()

Plot pcaviz objects

pcaviz_rotate() pcaviz_reflect() pcaviz_scale() pcaviz_translate() pcaviz_transform2d() matrix_rotate() matrix_reflect() matrix_scale() matrix_translate() matrix_transform2d()

Transformations of principal components

pcaviz() summary(<pcaviz>) print(<summary.pcaviz>) print(<pcaviz>)

Create and summarize pcaviz objects

popres

Principal components analysis of genetic variation in POPRES sample

regmap

Principal components analysis of A. thaliana RegMap data

subset(<pcaviz>)

Subsetting of pcaviz objects